Should missed Sunnah prayer be made up?
Making up missed voluntary acts of worship is from Sunnah.
Does the clipping of nails nullify ablution?
No, it does not, and it is preferable to wash the hands afterwards.
Who is responsible for performing the aqiqah?
All praise is due to Allah, and may peace and blessings be upon our Master, the Messenger of Allah.
The one upon whom the 'aqīqah is incumbent is whoever is obligated to financially maintain the newborn — whether the father, paternal grandfather, or mother. It is to be performed from their own wealth, not from the wealth of the newborn child.
As for one upon whom the financial maintenance of the newborn is not obligatory, they may not perform the 'aqīqah except with the permission of the one upon whom it is obligatory — namely, the father. And Allah Almighty knows best.
Which is better in night prayer: long standing (Qiyam) or long prostration (Sujood)?
Long standing (Qiyam) is better in prayer. However, a Muslim should also observe tranquility and composure in their prayer.